| 11. How can I track a population
in FCS Express?
Many times you might want to track a certain population that is defined by a complex
gating formula. Color dot plots seem like the ideal way of doing this, but currently
color dot plots default to tracking individual regions in a color and do not
let you define a color for complex regions. However, some simple configuration allows you
to obtain the desired result.
By default, a color dot plot shows the region colors if there are no overlays.
If there are overlays, the dot colors reflect the overlay colors. In order to
track a complex population, create two overlays that are from the same data
file. The steps below give a detailed explanation:
1) Assume you have two regions defined on forward and side scatter like in
the example below

Notice that the region defined by 1 AND 2 is dithered between the two region
colors. However, lets say you wanted to track that population in its own color.
2) Create a new plot with the data and add that same data file as an overlay.

You can see that the color is dithered equally between them, showing that there
is a lot of overlap between the two populations (as there should be, since it
is the same data set).
3) Go to the Format Screen and on the General tab turn dithering
off.
4) Go to the Overlays tab and enter 1A2 as the Gate Formula for
overlay #2.

5) Now if you press OK, the region that is defined by 1A2 will be completely
red.
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